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files
If you add some File over SSH or FTP to your Owncloud Data-Folder you will not see this.
Login via SSH and got to the OwnCloud Root Folder and Enter these Commands
php console.php files:scan <user_id> #For rescanning a users file
php console.php files:scan --all #For rescanning the files of all users
or if you using MySQl Database, run these SQL-Command:
TRUNCATE oc_filecache;